Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AC087499.5-201ENST00000452760 1342 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AL512638.1-201ENST00000457493 794 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AL390754.1-201ENST00000619088 582 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 CFTRP2-201ENST00000634304 199 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AC100757.3-201ENST00000622361 1406 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 PRAL-201ENST00000624952 3286 ntBASIC15.73■□□□□ 0.11
CFAP99D6REC4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CFAP99D6REC4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.73■□□□□ 0.11
CFAP99D6REC4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 HIST3H2BA-201ENST00000436555 524 ntBASIC15.72■□□□□ 0.11
CFAP99D6REC4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CFAP99D6REC4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.72■□□□□ 0.11
CFAP99D6REC4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.71■□□□□ 0.11
CFAP99D6REC4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CFAP99D6REC4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms