Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 AC079781.5-202ENST00000641784 3743 ntBASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 FAM86EP-206ENST00000510506 987 ntBASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SART3-203ENST00000546611 1184 ntBASIC14.9□□□□□ -0.02
AP4S1Q9Y587 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 HSPA7-201ENST00000445535 1927 ntBASIC14.9□□□□□ -0.02
AP4S1Q9Y587 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP4S1Q9Y587 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
AP4S1Q9Y587 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 WASH3P-207ENST00000560956 1394 ntBASIC14.88□□□□□ -0.03
AP4S1Q9Y587 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.88□□□□□ -0.03
AP4S1Q9Y587 FO538757.1-201ENST00000623083 1397 ntBASIC14.88□□□□□ -0.03
AP4S1Q9Y587 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
AP4S1Q9Y587 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms