Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UBE2D4Q9Y2X8 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 RPS8P6-201ENST00000426177 609 ntBASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AC073389.1-201ENST00000595595 795 ntBASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SPTSSB-204ENST00000617024 1292 ntBASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 AC012313.10-201ENST00000623509 926 ntBASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UBE2D4Q9Y2X8 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.96□□□□□ -0.65
UBE2D4Q9Y2X8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms