Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 CNN2P2-201ENST00000443536 909 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 CNN2P3-201ENST00000450201 906 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 AC109322.1-201ENST00000524499 1264 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MIR4453-201ENST00000584019 89 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 RN7SL828P-201ENST00000607615 303 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MIR6080-201ENST00000617359 66 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 AL136317.3-201ENST00000618497 906 ntBASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAPPC4Q9Y296 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 AC139749.1-202ENST00000617529 3139 ntBASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAPPC4Q9Y296 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms