Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 AC007686.3-201ENST00000619017 3487 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MIR648-201ENST00000385046 94 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 TFAMP1-201ENST00000412727 736 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 DNAJB3-201ENST00000446806 729 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 AC093724.1-201ENST00000448659 1027 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 RN7SL589P-201ENST00000481268 310 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 PRYP6-201ENST00000514804 343 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MIR3687-2-201ENST00000577708 61 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MIR3687-1-201ENST00000614492 61 ntBASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
HHLA3Q9XRX5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AP003680.1-201ENST00000598970 3660 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 YBX2P1-201ENST00000394192 760 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 MKNK2P1-201ENST00000437526 628 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 SPDYE11-202ENST00000450699 704 ntBASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.55□□□□□ -0.56
HHLA3Q9XRX5 AC005829.1-201ENST00000570002 483 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms