Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PCGF3-213ENST00000620529 1899 ntBASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 AL845331.1-201ENST00000424978 1190 ntBASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 KRT17P6-201ENST00000453795 1220 ntBASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 FOSL1P1-201ENST00000511041 816 ntBASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 AP005901.3-202ENST00000581653 237 ntBASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBQLN2Q9UHD9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 NSUN5P1-202ENST00000421140 1535 ntBASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 NSUN5P2-203ENST00000457352 1529 ntBASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 NUS1P2-201ENST00000417358 873 ntBASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 AC012615.1-201ENST00000565797 1299 ntBASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBQLN2Q9UHD9 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms