Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.42□□□□□ -0.1
LRFN1Q9P244 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LRFN1Q9P244 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC134915.1-201ENST00000426461 574 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 KRT18P43-201ENST00000469825 1281 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC015936.2-201ENST00000593177 259 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC017083.2-201ENST00000608069 979 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 CU634019.7-201ENST00000624153 1185 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 FP236241.2-201ENST00000624906 1185 ntBASIC14.41□□□□□ -0.1
LRFN1Q9P244 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
LRFN1Q9P244 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRFN1Q9P244 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC112492.5-201ENST00000421897 457 ntBASIC14.4□□□□□ -0.1
LRFN1Q9P244 TMEM14DP-201ENST00000422205 345 ntBASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL359711.2-201ENST00000563105 872 ntBASIC14.4□□□□□ -0.1
LRFN1Q9P244 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms