Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.94■□□□□ 0.14
HACD3Q9P035 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
HACD3Q9P035 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.94■□□□□ 0.14
HACD3Q9P035 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.94■□□□□ 0.14
HACD3Q9P035 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HACD3Q9P035 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HACD3Q9P035 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 AC018892.3-201ENST00000623986 2499 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 MIR943-201ENST00000401286 94 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.93■□□□□ 0.14
HACD3Q9P035 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.93■□□□□ 0.14
HACD3Q9P035 PMS2P2-201ENST00000425039 1128 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 RN7SL618P-201ENST00000477850 296 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 AC097493.3-201ENST00000509725 367 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 MIR4313-201ENST00000580760 101 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 AC097359.3-201ENST00000603982 1210 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.93■□□□□ 0.14
HACD3Q9P035 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
HACD3Q9P035 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HACD3Q9P035 AC087499.5-201ENST00000452760 1342 ntBASIC15.93■□□□□ 0.14
HACD3Q9P035 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HACD3Q9P035 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HACD3Q9P035 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HACD3Q9P035 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.92■□□□□ 0.14
HACD3Q9P035 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.92■□□□□ 0.14
HACD3Q9P035 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 TREML5P-201ENST00000421694 576 ntBASIC15.92■□□□□ 0.14
HACD3Q9P035 AC092580.3-201ENST00000430932 139 ntBASIC15.92■□□□□ 0.14
HACD3Q9P035 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.92■□□□□ 0.14
HACD3Q9P035 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.92■□□□□ 0.14
HACD3Q9P035 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.92■□□□□ 0.14
HACD3Q9P035 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.92■□□□□ 0.14
HACD3Q9P035 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.92■□□□□ 0.14
HACD3Q9P035 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HACD3Q9P035 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HACD3Q9P035 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HACD3Q9P035 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.92■□□□□ 0.14
HACD3Q9P035 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms