Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 C2orf69P2-201ENST00000562032 1123 ntBASIC17.4■□□□□ 0.38
VTA1Q9NP79 MIR3615-201ENST00000581999 87 ntBASIC17.4■□□□□ 0.38
VTA1Q9NP79 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
VTA1Q9NP79 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VTA1Q9NP79 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
VTA1Q9NP79 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.39■□□□□ 0.38
VTA1Q9NP79 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.39■□□□□ 0.38
VTA1Q9NP79 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.39■□□□□ 0.38
VTA1Q9NP79 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VTA1Q9NP79 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VTA1Q9NP79 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AC148477.4-201ENST00000613430 1793 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 BTBD6P1-201ENST00000412176 1267 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 KRT8P13-201ENST00000463294 1010 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AC004066.1-201ENST00000502488 802 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 ZNF767P-206ENST00000513792 565 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AL118558.3-201ENST00000607414 1079 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VTA1Q9NP79 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VTA1Q9NP79 AL662844.4-201ENST00000606367 2838 ntBASIC17.39■□□□□ 0.37
VTA1Q9NP79 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 TPM3P8-201ENST00000330554 643 ntBASIC17.38■□□□□ 0.37
VTA1Q9NP79 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VTA1Q9NP79 AL139094.1-201ENST00000405549 1188 ntBASIC17.38■□□□□ 0.37
VTA1Q9NP79 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 MIR4741-201ENST00000579822 90 ntBASIC17.38■□□□□ 0.37
VTA1Q9NP79 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 ECM1P1-201ENST00000604092 1279 ntBASIC17.38■□□□□ 0.37
VTA1Q9NP79 AL022328.3-201ENST00000607943 679 ntBASIC17.38■□□□□ 0.37
VTA1Q9NP79 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.38■□□□□ 0.37
VTA1Q9NP79 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms