Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SLC25A6P4-201ENST00000586535 553 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SPTSSB-204ENST00000617024 1292 ntBASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COMMD4Q9H0A8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 MROH4P-201ENST00000431302 1578 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AC002056.1-201ENST00000395613 760 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AC105233.2-201ENST00000523697 349 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AF228730.5-201ENST00000530288 346 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 MIR4313-201ENST00000580760 101 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AC004877.2-201ENST00000623941 599 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AC106881.1-201ENST00000605849 3329 ntBASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
COMMD4Q9H0A8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC013726.1-201ENST00000563747 2285 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms