Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC092978.1-202ENST00000637590 1327 ntBASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP4Q9C0A0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.39■□□□□ 0.7
CNTNAP4Q9C0A0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
CNTNAP4Q9C0A0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNTNAP4Q9C0A0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNTNAP4Q9C0A0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 TUBB8P8-201ENST00000458717 1058 ntBASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AL162426.1-201ENST00000624141 743 ntBASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AC004923.1-202ENST00000642106 209 ntBASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 AC080080.1-201ENST00000625121 2420 ntBASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP4Q9C0A0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 HTR7P1-202ENST00000624664 4411 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AP000593.2-201ENST00000542775 1433 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AC005324.6-201ENST00000587972 613 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AL805961.1-203ENST00000641078 1258 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 AC068587.8-201ENST00000641239 219 ntBASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP4Q9C0A0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 GHSR-202ENST00000427970 912 ntBASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 RN7SL163P-201ENST00000583100 276 ntBASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CNTNAP4Q9C0A0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms