Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU6-207P-201ENST00000384137 107 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 MTCO2P33-201ENST00000402100 465 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 GALM-202ENST00000410063 1023 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC009161.1-201ENST00000417306 376 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 MTCYBP34-201ENST00000439552 670 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TPTE2P6-201ENST00000440905 1275 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TSACC-206ENST00000466306 477 ntTSL 3 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 RPS3AP17-201ENST00000472594 777 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 OR7E157P-201ENST00000494376 911 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC019193.1-201ENST00000506678 823 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC113347.3-201ENST00000509113 148 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 NAP1L1P1-201ENST00000524793 1063 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AC069304.2-201ENST00000605154 435 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 FNBP1P1-201ENST00000551203 1994 ntBASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC10.06□□□□□ -0.8
KRTAP3-3Q9BYR6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 FPGT-201ENST00000370894 1380 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OR51V1-201ENST00000321255 966 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU4-91P-201ENST00000364778 135 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 AGPAT4-202ENST00000366905 942 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 OR10N1P-201ENST00000392758 869 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 ZSCAN12P1-201ENST00000406489 419 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU4-27P-201ENST00000410889 139 ntBASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC10.05□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms