Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SMOQ99835 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.36■□□□□ 0.21
SMOQ99835 TMEM14DP-201ENST00000422205 345 ntBASIC16.36■□□□□ 0.21
SMOQ99835 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 AL162726.2-201ENST00000438986 1017 ntBASIC16.36■□□□□ 0.21
SMOQ99835 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
SMOQ99835 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.36■□□□□ 0.21
SMOQ99835 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.36■□□□□ 0.21
SMOQ99835 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.36■□□□□ 0.21
SMOQ99835 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.36■□□□□ 0.21
SMOQ99835 AC010319.3-201ENST00000597028 470 ntBASIC16.36■□□□□ 0.21
SMOQ99835 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMOQ99835 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.36■□□□□ 0.21
SMOQ99835 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SMOQ99835 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.35■□□□□ 0.21
SMOQ99835 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.35■□□□□ 0.21
SMOQ99835 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.35■□□□□ 0.21
SMOQ99835 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.35■□□□□ 0.21
SMOQ99835 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 CLUHP6-201ENST00000580789 941 ntBASIC16.35■□□□□ 0.21
SMOQ99835 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SMOQ99835 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMOQ99835 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMOQ99835 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.34■□□□□ 0.21
SMOQ99835 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.34■□□□□ 0.21
SMOQ99835 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.34■□□□□ 0.21
SMOQ99835 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.34■□□□□ 0.21
SMOQ99835 TTTY23B-201ENST00000442790 549 ntBASIC16.34■□□□□ 0.21
SMOQ99835 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.34■□□□□ 0.21
SMOQ99835 ENPP7P5-201ENST00000541031 1031 ntBASIC16.34■□□□□ 0.21
SMOQ99835 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.34■□□□□ 0.21
SMOQ99835 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.34■□□□□ 0.21
SMOQ99835 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.34■□□□□ 0.21
SMOQ99835 AC093813.1-201ENST00000605066 256 ntBASIC16.34■□□□□ 0.21
SMOQ99835 AC005252.2-201ENST00000624630 1141 ntBASIC16.34■□□□□ 0.21
SMOQ99835 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SMOQ99835 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.34■□□□□ 0.21
SMOQ99835 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMOQ99835 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SMOQ99835 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms