Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRPF18Q99633 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRPF18Q99633 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRPF18Q99633 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRPF18Q99633 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRPF18Q99633 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRPF18Q99633 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.35■□□□□ 0.05
PRPF18Q99633 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.34■□□□□ 0.05
PRPF18Q99633 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.34■□□□□ 0.05
PRPF18Q99633 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.34■□□□□ 0.05
PRPF18Q99633 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.34■□□□□ 0.05
PRPF18Q99633 AL591424.1-201ENST00000442569 1213 ntBASIC15.34■□□□□ 0.05
PRPF18Q99633 KRT18P2-201ENST00000447938 1258 ntBASIC15.34■□□□□ 0.05
PRPF18Q99633 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 AP002472.1-201ENST00000577490 586 ntBASIC15.34■□□□□ 0.05
PRPF18Q99633 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.34■□□□□ 0.05
PRPF18Q99633 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PRPF18Q99633 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.34■□□□□ 0.05
PRPF18Q99633 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRPF18Q99633 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.33■□□□□ 0.05
PRPF18Q99633 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
PRPF18Q99633 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
PRPF18Q99633 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PRPF18Q99633 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PRPF18Q99633 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRPF18Q99633 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.33■□□□□ 0.05
PRPF18Q99633 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PRPF18Q99633 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.33■□□□□ 0.04
PRPF18Q99633 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.33■□□□□ 0.04
PRPF18Q99633 RARRES2P8-201ENST00000566335 367 ntBASIC15.33■□□□□ 0.04
PRPF18Q99633 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.33■□□□□ 0.04
PRPF18Q99633 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 AKAP8P1-201ENST00000434743 1349 ntBASIC15.33■□□□□ 0.04
PRPF18Q99633 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PRPF18Q99633 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PRPF18Q99633 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRPF18Q99633 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRPF18Q99633 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRPF18Q99633 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRPF18Q99633 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRPF18Q99633 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms