Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YME1L1Q96TA2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.77■□□□□ 0.28
YME1L1Q96TA2 AC138028.6-201ENST00000616106 1482 ntBASIC16.77■□□□□ 0.28
YME1L1Q96TA2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
YME1L1Q96TA2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
YME1L1Q96TA2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 AC091804.1-201ENST00000486888 567 ntBASIC16.76■□□□□ 0.27
YME1L1Q96TA2 RPSAP36-202ENST00000494591 1261 ntBASIC16.76■□□□□ 0.27
YME1L1Q96TA2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
YME1L1Q96TA2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AL354989.2-201ENST00000435838 1540 ntBASIC16.75■□□□□ 0.27
YME1L1Q96TA2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 FNTAP2-201ENST00000430308 634 ntBASIC16.75■□□□□ 0.27
YME1L1Q96TA2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
YME1L1Q96TA2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YME1L1Q96TA2 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms