Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 LINC00554-201ENST00000564841 3011 ntBASIC12.79□□□□□ -0.36
ZNF48Q96MX3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AC015936.2-201ENST00000593177 259 ntBASIC12.79□□□□□ -0.36
ZNF48Q96MX3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF48Q96MX3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC063926.3-201ENST00000624734 5658 ntBASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ANKRD19P-201ENST00000338192 862 ntBASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 KRT18P64-201ENST00000434946 1219 ntBASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 USP32P1-208ENST00000506594 1164 ntBASIC12.78□□□□□ -0.36
ZNF48Q96MX3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.78□□□□□ -0.36
ZNF48Q96MX3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms