Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 KRT8P14-201ENST00000414254 1442 ntBASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 FGFR3P1-201ENST00000449999 601 ntBASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 AC106794.1-201ENST00000506935 792 ntBASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 AC020922.3-201ENST00000595064 547 ntBASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM43Q96BQ3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 RN7SL818P-201ENST00000485099 259 ntBASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AC103988.2-201ENST00000561804 725 ntBASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 RN7SL725P-201ENST00000606439 259 ntBASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 AL158070.2-201ENST00000623713 1621 ntBASIC16.78■□□□□ 0.28
TRIM43Q96BQ3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 AC007787.1-201ENST00000588095 1583 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 AC004899.1-201ENST00000424687 1714 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 RPL13AP19-201ENST00000434320 584 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 AC098935.1-201ENST00000446057 611 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 NPM1P43-201ENST00000558669 786 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 RN7SL163P-201ENST00000583100 276 ntBASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM43Q96BQ3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRIM43Q96BQ3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM43Q96BQ3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms