Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL607033.1-201ENST00000623900 1599 ntBASIC14.14□□□□□ -0.15
CPNE4Q96A23 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 AC015922.1-201ENST00000421102 1152 ntBASIC14.14□□□□□ -0.15
CPNE4Q96A23 RPL13P2-201ENST00000440687 659 ntBASIC14.14□□□□□ -0.15
CPNE4Q96A23 SPTLC1P1-201ENST00000447199 261 ntBASIC14.14□□□□□ -0.15
CPNE4Q96A23 AC093004.1-201ENST00000508850 424 ntBASIC14.14□□□□□ -0.15
CPNE4Q96A23 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CPNE4Q96A23 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CPNE4Q96A23 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 MEIS3P1-201ENST00000495167 958 ntBASIC14.13□□□□□ -0.15
CPNE4Q96A23 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 LINC01115-203ENST00000606068 577 ntBASIC14.13□□□□□ -0.15
CPNE4Q96A23 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.13□□□□□ -0.15
CPNE4Q96A23 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 AL365203.3-201ENST00000609742 2057 ntBASIC14.13□□□□□ -0.15
CPNE4Q96A23 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CPNE4Q96A23 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.13□□□□□ -0.15
CPNE4Q96A23 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CPNE4Q96A23 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CPNE4Q96A23 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CPNE4Q96A23 AL391825.1-201ENST00000457671 1364 ntBASIC14.12□□□□□ -0.15
CPNE4Q96A23 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.12□□□□□ -0.15
CPNE4Q96A23 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CPNE4Q96A23 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CPNE4Q96A23 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms