Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CKAP2Q8WWK9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC004987.2-201ENST00000395959 1148 ntBASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AL450472.2-201ENST00000603663 1156 ntBASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC126755.1-201ENST00000525846 6405 ntBASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 AC079781.5-202ENST00000641784 3743 ntBASIC15.63■□□□□ 0.09
CKAP2Q8WWK9 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 AC092135.3-201ENST00000624151 1846 ntBASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 PRYP6-201ENST00000514804 343 ntBASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 MIR1199-201ENST00000621445 119 ntBASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 MBLAC2-202ENST00000514906 1936 ntBASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CKAP2Q8WWK9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CKAP2Q8WWK9 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms