Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AC132938.2-201ENST00000579188 680 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AC025181.2-201ENST00000606994 802 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 IGHV3-72-202ENST00000621503 303 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AL591163.1-201ENST00000641757 987 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AC063926.2-201ENST00000623766 1308 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 AC132872.4-202ENST00000622924 2756 ntBASIC18.17■□□□□ 0.5
PNMA1Q8ND90 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PNMA1Q8ND90 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 AL512384.1-201ENST00000406683 331 ntBASIC18.16■□□□□ 0.5
PNMA1Q8ND90 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 AC107373.2-201ENST00000607735 490 ntBASIC18.16■□□□□ 0.5
PNMA1Q8ND90 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PNMA1Q8ND90 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 C1QBPP1-201ENST00000400117 770 ntBASIC18.15■□□□□ 0.5
PNMA1Q8ND90 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 KRT17P7-201ENST00000451704 1104 ntBASIC18.15■□□□□ 0.5
PNMA1Q8ND90 GAPDHP40-201ENST00000505218 1006 ntBASIC18.15■□□□□ 0.5
PNMA1Q8ND90 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PNMA1Q8ND90 KRT8P22-201ENST00000562317 1415 ntBASIC18.15■□□□□ 0.5
PNMA1Q8ND90 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PNMA1Q8ND90 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PNMA1Q8ND90 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.14■□□□□ 0.5
PNMA1Q8ND90 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PNMA1Q8ND90 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.14■□□□□ 0.49
PNMA1Q8ND90 AC020658.6-201ENST00000623564 1870 ntBASIC18.14■□□□□ 0.49
PNMA1Q8ND90 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PNMA1Q8ND90 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.14■□□□□ 0.49
PNMA1Q8ND90 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PNMA1Q8ND90 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms