Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 Z92544.3-201ENST00000624747 417 ntBASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.38■□□□□ 0.69
CHD1LQ86WJ1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 SERBP1P3-201ENST00000459980 809 ntBASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 TEX28P1-201ENST00000613479 1221 ntBASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 AL138828.2-201ENST00000615812 383 ntBASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 TEX28P2-201ENST00000617764 1221 ntBASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.37■□□□□ 0.69
CHD1LQ86WJ1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 FER1L4-210ENST00000615531 5998 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 RPL13P2-201ENST00000440687 659 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 AF228730.6-201ENST00000641497 218 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 AC084121.3-201ENST00000641716 218 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 AL513477.1-201ENST00000602865 2407 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 MROH4P-201ENST00000431302 1578 ntBASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD1LQ86WJ1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD1LQ86WJ1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms