Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC018529.1-201ENST00000613063 361 ntBASIC13.94□□□□□ -0.18
RTTNQ86VV8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AC091951.1-201ENST00000512854 2465 ntBASIC13.94□□□□□ -0.18
RTTNQ86VV8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.94□□□□□ -0.18
RTTNQ86VV8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RTTNQ86VV8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 SPCS2P4-201ENST00000436160 681 ntBASIC13.93□□□□□ -0.18
RTTNQ86VV8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RTTNQ86VV8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.93□□□□□ -0.18
RTTNQ86VV8 SSR4P1-203ENST00000599569 2260 ntBASIC13.93□□□□□ -0.18
RTTNQ86VV8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 MIR6805-201ENST00000615055 62 ntBASIC13.92□□□□□ -0.18
RTTNQ86VV8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
RTTNQ86VV8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RTTNQ86VV8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms