Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AC087481.3-201ENST00000602886 1894 ntBASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 AC002056.1-201ENST00000395613 760 ntBASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 AC027612.4-201ENST00000605371 583 ntBASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 REXO1L8P-201ENST00000604378 1897 ntBASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDZRN4Q6ZMN7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 AC105339.1-204ENST00000636249 355 ntBASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDZRN4Q6ZMN7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CICP20-201ENST00000443330 2801 ntBASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDZRN4Q6ZMN7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms