Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNKSR3Q6P9H4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 TMEM198B-204ENST00000484016 896 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AL391280.1-201ENST00000506969 1062 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 MIR4722-201ENST00000578292 60 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 MIR6727-201ENST00000620702 65 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AP001002.3-201ENST00000623482 206 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 AC022188.1-201ENST00000620960 1664 ntBASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CNKSR3Q6P9H4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.64■□□□□ 0.26
CNKSR3Q6P9H4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CNKSR3Q6P9H4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AL354877.1-201ENST00000424412 413 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AC022616.1-201ENST00000518688 554 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AC005730.2-201ENST00000564549 1184 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 MIR4706-201ENST00000582134 82 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AL603764.1-201ENST00000636452 321 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 KRT8P4-201ENST00000509735 1454 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TUBBP5-203ENST00000508529 1334 ntBASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNKSR3Q6P9H4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC018695.7-201ENST00000624587 2492 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms