Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 NDUFS6P1-201ENST00000485187 316 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 RCC2P8-201ENST00000502779 1035 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AL358472.3-201ENST00000608147 415 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AL357563.1-201ENST00000404728 395 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 CHMP1AP1-201ENST00000445563 662 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 LYPLA2P1-203ENST00000447689 696 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AC020916.1-201ENST00000587762 1774 ntBASIC13.36□□□□□ -0.27
LRRK2Q5S007 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 LRRC59-203ENST00000576448 1531 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC008764.6-201ENST00000595909 2069 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 SNX15-201ENST00000352068 771 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 GCSHP3-201ENST00000431120 391 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC244197.1-201ENST00000456494 951 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 MIR4783-201ENST00000580343 82 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC138466.3-201ENST00000619983 221 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 AL132780.4-201ENST00000624870 1135 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC012313.1-201ENST00000593393 3059 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 BX323043.1-201ENST00000641006 1765 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms