Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 KRT8P22-201ENST00000562317 1415 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 OR8S1-201ENST00000310194 1080 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 AL162726.2-201ENST00000438986 1017 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 RPL13AP25-201ENST00000484130 612 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 AC120045.2-201ENST00000567334 178 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 AC010319.3-201ENST00000597028 470 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 CU634019.7-201ENST00000624153 1185 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 FP236241.2-201ENST00000624906 1185 ntBASIC19.2■□□□□ 0.66
ATP2B3Q16720 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP2B3Q16720 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP2B3Q16720 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 AC105917.1-201ENST00000506637 2539 ntBASIC19.19■□□□□ 0.66
ATP2B3Q16720 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 ABBA01031660.1-201ENST00000635219 756 ntBASIC19.19■□□□□ 0.66
ATP2B3Q16720 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP2B3Q16720 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP2B3Q16720 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 PAUPAR-201ENST00000630360 2965 ntBASIC19.18■□□□□ 0.66
ATP2B3Q16720 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms