Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH1Q08174 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH1Q08174 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH1Q08174 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH1Q08174 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.16■□□□□ 0.02
PCDH1Q08174 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 TOMM22P5-201ENST00000416399 439 ntBASIC15.16■□□□□ 0.02
PCDH1Q08174 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 AC067863.1-201ENST00000494933 530 ntBASIC15.16■□□□□ 0.02
PCDH1Q08174 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH1Q08174 SPDYE12P-201ENST00000618416 771 ntBASIC15.16■□□□□ 0.02
PCDH1Q08174 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 MIR600HG-201ENST00000449175 5984 ntBASIC15.16■□□□□ 0.02
PCDH1Q08174 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH1Q08174 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH1Q08174 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH1Q08174 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH1Q08174 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH1Q08174 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH1Q08174 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH1Q08174 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH1Q08174 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH1Q08174 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 KLF2P3-201ENST00000451977 1087 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH1Q08174 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 SLED1-202ENST00000512051 380 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH1Q08174 AC010336.2-201ENST00000564226 506 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH1Q08174 AL158211.3-201ENST00000607385 239 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH1Q08174 AC073592.8-201ENST00000624126 511 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH1Q08174 C18orf15-201ENST00000623680 2534 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 AC087499.5-201ENST00000452760 1342 ntBASIC15.15■□□□□ 0.02
PCDH1Q08174 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH1Q08174 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH1Q08174 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH1Q08174 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH1Q08174 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH1Q08174 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms