Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.87□□□□□ -0.03
RAE1P78406 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 AC069120.2-201ENST00000524091 540 ntBASIC14.87□□□□□ -0.03
RAE1P78406 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.87□□□□□ -0.03
RAE1P78406 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.87□□□□□ -0.03
RAE1P78406 AC140878.1-201ENST00000565277 250 ntBASIC14.87□□□□□ -0.03
RAE1P78406 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 AL109936.8-201ENST00000641772 604 ntBASIC14.87□□□□□ -0.03
RAE1P78406 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.87□□□□□ -0.03
RAE1P78406 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
RAE1P78406 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RAE1P78406 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAE1P78406 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 MROH4P-201ENST00000431302 1578 ntBASIC14.86□□□□□ -0.03
RAE1P78406 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 AC015922.1-201ENST00000421102 1152 ntBASIC14.86□□□□□ -0.03
RAE1P78406 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 RN7SL618P-201ENST00000477850 296 ntBASIC14.86□□□□□ -0.03
RAE1P78406 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.86□□□□□ -0.03
RAE1P78406 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 AC027369.6-201ENST00000525520 931 ntBASIC14.86□□□□□ -0.03
RAE1P78406 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.86□□□□□ -0.03
RAE1P78406 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.86□□□□□ -0.03
RAE1P78406 AL844908.2-201ENST00000609461 460 ntBASIC14.86□□□□□ -0.03
RAE1P78406 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.86□□□□□ -0.03
RAE1P78406 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RAE1P78406 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAE1P78406 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAE1P78406 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
RAE1P78406 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
RAE1P78406 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.85□□□□□ -0.03
RAE1P78406 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 LINC02228-204ENST00000642115 2962 ntBASIC14.85□□□□□ -0.03
RAE1P78406 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms