Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.55□□□□□ -0.24
AP3S2P59780 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.55□□□□□ -0.24
AP3S2P59780 AP005117.1-201ENST00000584346 1413 ntBASIC13.55□□□□□ -0.24
AP3S2P59780 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AP3S2P59780 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AP3S2P59780 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.54□□□□□ -0.24
AP3S2P59780 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP3S2P59780 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.54□□□□□ -0.24
AP3S2P59780 MIR3909-201ENST00000579518 119 ntBASIC13.54□□□□□ -0.24
AP3S2P59780 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 GGTLC5P-201ENST00000617623 998 ntBASIC13.54□□□□□ -0.24
AP3S2P59780 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 KRT18P1-202ENST00000452408 1331 ntBASIC13.54□□□□□ -0.24
AP3S2P59780 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AP3S2P59780 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.54□□□□□ -0.24
AP3S2P59780 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
AP3S2P59780 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AP3S2P59780 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S2P59780 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.53□□□□□ -0.24
AP3S2P59780 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
AP3S2P59780 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 AC015656.1-201ENST00000624209 3578 ntBASIC13.53□□□□□ -0.24
AP3S2P59780 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.53□□□□□ -0.24
AP3S2P59780 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
AP3S2P59780 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.53□□□□□ -0.24
AP3S2P59780 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.53□□□□□ -0.24
AP3S2P59780 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
AP3S2P59780 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.53□□□□□ -0.24
AP3S2P59780 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AP3S2P59780 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms