Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.03■□□□□ -0
CLDN6P56747 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.03■□□□□ -0
CLDN6P56747 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.03■□□□□ -0
CLDN6P56747 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.03■□□□□ -0
CLDN6P56747 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 AL008638.5-201ENST00000623814 1298 ntBASIC15.03■□□□□ -0
CLDN6P56747 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN6P56747 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.02■□□□□ -0
CLDN6P56747 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 DRD5P1-201ENST00000456605 1438 ntBASIC15.02■□□□□ -0
CLDN6P56747 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.02■□□□□ -0
CLDN6P56747 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 MIR1202-201ENST00000408529 83 ntBASIC15.02■□□□□ -0
CLDN6P56747 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.02■□□□□ -0
CLDN6P56747 FNTAP2-201ENST00000430308 634 ntBASIC15.02■□□□□ -0
CLDN6P56747 AL591846.1-201ENST00000451736 433 ntBASIC15.02■□□□□ -0
CLDN6P56747 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.02■□□□□ -0
CLDN6P56747 POU5F1P6-201ENST00000466990 990 ntBASIC15.02■□□□□ -0
CLDN6P56747 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.02■□□□□ -0
CLDN6P56747 HIST2H2BC-201ENST00000498492 580 ntBASIC15.02■□□□□ -0
CLDN6P56747 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN6P56747 AC023310.1-201ENST00000554836 735 ntBASIC15.02■□□□□ -0
CLDN6P56747 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.02■□□□□ -0
CLDN6P56747 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.02■□□□□ -0
CLDN6P56747 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN6P56747 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CLDN6P56747 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDN6P56747 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLDN6P56747 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLDN6P56747 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN6P56747 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN6P56747 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN6P56747 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN6P56747 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN6P56747 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms