Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.7□□□□□ -0.06
CDH12P55289 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
CDH12P55289 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH12P55289 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CDH12P55289 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 MIR940-201ENST00000401276 94 ntBASIC14.7□□□□□ -0.06
CDH12P55289 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 FAM58CP-201ENST00000435741 640 ntBASIC14.7□□□□□ -0.06
CDH12P55289 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CDH12P55289 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.7□□□□□ -0.06
CDH12P55289 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 AC061975.2-201ENST00000581722 295 ntBASIC14.7□□□□□ -0.06
CDH12P55289 AC024267.1-201ENST00000582320 895 ntBASIC14.7□□□□□ -0.06
CDH12P55289 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CDH12P55289 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 AC008267.7-201ENST00000624570 1194 ntBASIC14.7□□□□□ -0.06
CDH12P55289 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CDH12P55289 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CDH12P55289 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH12P55289 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 KRT8P44-201ENST00000441609 1350 ntBASIC14.7□□□□□ -0.06
CDH12P55289 AC023908.3-201ENST00000564211 3047 ntBASIC14.7□□□□□ -0.06
CDH12P55289 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.7□□□□□ -0.06
CDH12P55289 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CDH12P55289 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDH12P55289 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 BNIP3P1-202ENST00000550043 1585 ntBASIC14.69□□□□□ -0.06
CDH12P55289 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CDH12P55289 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.69□□□□□ -0.06
CDH12P55289 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH12P55289 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH12P55289 FAM86C2P-203ENST00000528684 1004 ntBASIC14.69□□□□□ -0.06
CDH12P55289 MIR4313-201ENST00000580760 101 ntBASIC14.69□□□□□ -0.06
CDH12P55289 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.69□□□□□ -0.06
CDH12P55289 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 REXO1L1P-202ENST00000608646 1974 ntBASIC14.69□□□□□ -0.06
CDH12P55289 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDH12P55289 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
CDH12P55289 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDH12P55289 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.69□□□□□ -0.06
CDH12P55289 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.68□□□□□ -0.06
CDH12P55289 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 AL691432.1-201ENST00000596308 1422 ntBASIC14.68□□□□□ -0.06
CDH12P55289 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.68□□□□□ -0.06
CDH12P55289 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 AC126365.1-201ENST00000578585 1514 ntBASIC14.68□□□□□ -0.06
CDH12P55289 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDH12P55289 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CDH12P55289 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms