Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 AC008677.1-201ENST00000519230 1561 ntBASIC15□□□□□ -0.01
NR1H2P55055 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
NR1H2P55055 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15□□□□□ -0.01
NR1H2P55055 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15□□□□□ -0.01
NR1H2P55055 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 HCG4B-203ENST00000450128 991 ntBASIC15□□□□□ -0.01
NR1H2P55055 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15□□□□□ -0.01
NR1H2P55055 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 AP001160.2-201ENST00000596071 487 ntBASIC15□□□□□ -0.01
NR1H2P55055 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NR1H2P55055 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NR1H2P55055 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15□□□□□ -0.01
NR1H2P55055 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC107918.4-201ENST00000641966 3141 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 AC105250.1-201ENST00000509378 2057 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 C18orf15-201ENST00000623680 2534 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NR1H2P55055 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 AC211486.1-202ENST00000416371 468 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC211476.1-201ENST00000503899 468 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.99□□□□□ -0.01
NR1H2P55055 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC005829.1-201ENST00000570002 483 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC004790.2-201ENST00000623588 572 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 AC134684.3-201ENST00000641758 218 ntBASIC14.99□□□□□ -0.01
NR1H2P55055 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.99□□□□□ -0.01
NR1H2P55055 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NR1H2P55055 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.99□□□□□ -0.01
NR1H2P55055 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NR1H2P55055 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.98□□□□□ -0.01
NR1H2P55055 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NR1H2P55055 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms