Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.13■□□□□ 0.17
ATXN3P54252 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ATXN3P54252 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.13■□□□□ 0.17
ATXN3P54252 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 WASH4P-201ENST00000564273 1246 ntBASIC16.13■□□□□ 0.17
ATXN3P54252 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.13■□□□□ 0.17
ATXN3P54252 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ATXN3P54252 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.13■□□□□ 0.17
ATXN3P54252 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATXN3P54252 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ATXN3P54252 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 MTHFR-217ENST00000641820 1569 ntBASIC16.13■□□□□ 0.17
ATXN3P54252 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.13■□□□□ 0.17
ATXN3P54252 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ATXN3P54252 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.12■□□□□ 0.17
ATXN3P54252 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 TPRX2P-201ENST00000535362 881 ntBASIC16.12■□□□□ 0.17
ATXN3P54252 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 AC044860.1-202ENST00000559481 777 ntBASIC16.12■□□□□ 0.17
ATXN3P54252 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 AL133215.2-201ENST00000609242 977 ntBASIC16.12■□□□□ 0.17
ATXN3P54252 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.12■□□□□ 0.17
ATXN3P54252 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 SLC7A15P-201ENST00000424028 1363 ntBASIC16.12■□□□□ 0.17
ATXN3P54252 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATXN3P54252 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.12■□□□□ 0.17
ATXN3P54252 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.11■□□□□ 0.17
ATXN3P54252 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 AC126177.1-201ENST00000547829 2218 ntBASIC16.11■□□□□ 0.17
ATXN3P54252 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATXN3P54252 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
ATXN3P54252 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATXN3P54252 AL596087.1-201ENST00000400979 1969 ntBASIC16.11■□□□□ 0.17
ATXN3P54252 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms