Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.29■□□□□ 0.36
LBX1P52954 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LBX1P52954 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.29■□□□□ 0.36
LBX1P52954 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.29■□□□□ 0.36
LBX1P52954 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.29■□□□□ 0.36
LBX1P52954 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 AC007326.1-201ENST00000604539 458 ntBASIC17.29■□□□□ 0.36
LBX1P52954 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 TNXA-203ENST00000507684 2038 ntBASIC17.29■□□□□ 0.36
LBX1P52954 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LBX1P52954 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.29■□□□□ 0.36
LBX1P52954 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.29■□□□□ 0.36
LBX1P52954 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LBX1P52954 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 AL138781.2-201ENST00000617896 1843 ntBASIC17.28■□□□□ 0.36
LBX1P52954 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 FKBP4P6-201ENST00000457486 1332 ntBASIC17.28■□□□□ 0.36
LBX1P52954 KRT18P9-201ENST00000604826 1300 ntBASIC17.28■□□□□ 0.36
LBX1P52954 AL008718.2-201ENST00000609206 1313 ntBASIC17.28■□□□□ 0.36
LBX1P52954 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 AC078875.1-201ENST00000431907 724 ntBASIC17.28■□□□□ 0.36
LBX1P52954 AC012441.2-201ENST00000444843 739 ntBASIC17.28■□□□□ 0.36
LBX1P52954 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.28■□□□□ 0.36
LBX1P52954 ORAOV1P1-201ENST00000503108 395 ntBASIC17.28■□□□□ 0.36
LBX1P52954 MESTP3-201ENST00000503460 968 ntBASIC17.28■□□□□ 0.36
LBX1P52954 AC002472.3-201ENST00000640124 621 ntBASIC17.28■□□□□ 0.36
LBX1P52954 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.28■□□□□ 0.36
LBX1P52954 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.28■□□□□ 0.36
LBX1P52954 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LBX1P52954 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.28■□□□□ 0.36
LBX1P52954 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LBX1P52954 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.27■□□□□ 0.36
LBX1P52954 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 PCDHB18P-201ENST00000524813 2368 ntBASIC17.27■□□□□ 0.36
LBX1P52954 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LBX1P52954 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.27■□□□□ 0.36
LBX1P52954 DUTP3-201ENST00000450025 415 ntBASIC17.27■□□□□ 0.36
LBX1P52954 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC17.27■□□□□ 0.36
LBX1P52954 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.27■□□□□ 0.36
LBX1P52954 AC004466.1-201ENST00000599515 1080 ntBASIC17.27■□□□□ 0.36
LBX1P52954 AL157813.1-201ENST00000612996 587 ntBASIC17.27■□□□□ 0.36
LBX1P52954 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.27■□□□□ 0.36
LBX1P52954 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LBX1P52954 AC136759.1-202ENST00000530858 2194 ntBASIC17.27■□□□□ 0.36
LBX1P52954 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.27■□□□□ 0.36
LBX1P52954 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.27■□□□□ 0.35
LBX1P52954 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LBX1P52954 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LBX1P52954 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LBX1P52954 AC009113.1-201ENST00000570267 2443 ntBASIC17.27■□□□□ 0.35
LBX1P52954 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LBX1P52954 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
LBX1P52954 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LBX1P52954 AC018892.3-201ENST00000623986 2499 ntBASIC17.26■□□□□ 0.35
LBX1P52954 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LBX1P52954 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms