Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RN7SL574P-201ENST00000581512 297 ntBASIC19.13■□□□□ 0.65
NUP98P52948 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP98P52948 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 AL513523.2-202ENST00000427283 2040 ntBASIC19.13■□□□□ 0.65
NUP98P52948 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP98P52948 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
NUP98P52948 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.12■□□□□ 0.65
NUP98P52948 BX284668.4-201ENST00000453917 508 ntBASIC19.12■□□□□ 0.65
NUP98P52948 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP98P52948 MIR3619-201ENST00000579667 83 ntBASIC19.12■□□□□ 0.65
NUP98P52948 AC244157.2-201ENST00000616239 1006 ntBASIC19.12■□□□□ 0.65
NUP98P52948 AC022748.3-201ENST00000621828 275 ntBASIC19.12■□□□□ 0.65
NUP98P52948 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP98P52948 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 KRT8P4-201ENST00000509735 1454 ntBASIC19.12■□□□□ 0.65
NUP98P52948 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.12■□□□□ 0.65
NUP98P52948 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NUP98P52948 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NUP98P52948 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.12■□□□□ 0.65
NUP98P52948 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP98P52948 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.11■□□□□ 0.65
NUP98P52948 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP98P52948 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 CICP13-201ENST00000422015 2789 ntBASIC19.11■□□□□ 0.65
NUP98P52948 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP98P52948 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.11■□□□□ 0.65
NUP98P52948 CHMP1AP1-201ENST00000445563 662 ntBASIC19.11■□□□□ 0.65
NUP98P52948 AC126915.1-201ENST00000522847 1038 ntBASIC19.11■□□□□ 0.65
NUP98P52948 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.11■□□□□ 0.65
NUP98P52948 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NUP98P52948 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP98P52948 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP98P52948 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUP98P52948 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.1■□□□□ 0.65
NUP98P52948 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.1■□□□□ 0.65
NUP98P52948 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP98P52948 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP98P52948 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 AP001505.2-201ENST00000616815 443 ntBASIC19.1■□□□□ 0.65
NUP98P52948 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
NUP98P52948 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 AC090616.6-203ENST00000579186 1945 ntBASIC19.1■□□□□ 0.65
NUP98P52948 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP98P52948 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.1■□□□□ 0.65
NUP98P52948 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP98P52948 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.09■□□□□ 0.65
NUP98P52948 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.09■□□□□ 0.65
NUP98P52948 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms