Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMSP52788 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.79□□□□□ -0.04
SMSP52788 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.79□□□□□ -0.04
SMSP52788 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.79□□□□□ -0.04
SMSP52788 HAUS4P1-201ENST00000406739 1145 ntBASIC14.79□□□□□ -0.04
SMSP52788 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.79□□□□□ -0.04
SMSP52788 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.79□□□□□ -0.04
SMSP52788 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.79□□□□□ -0.04
SMSP52788 RN7SL692P-201ENST00000464677 288 ntBASIC14.79□□□□□ -0.04
SMSP52788 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 KRT18P34-201ENST00000488218 1270 ntBASIC14.79□□□□□ -0.04
SMSP52788 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.79□□□□□ -0.04
SMSP52788 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.79□□□□□ -0.04
SMSP52788 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.79□□□□□ -0.04
SMSP52788 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.79□□□□□ -0.04
SMSP52788 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SMSP52788 AC022144.1-201ENST00000602255 1580 ntBASIC14.79□□□□□ -0.04
SMSP52788 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SMSP52788 AL590560.3-201ENST00000623350 461 ntBASIC14.79□□□□□ -0.04
SMSP52788 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.79□□□□□ -0.04
SMSP52788 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMSP52788 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMSP52788 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.78□□□□□ -0.04
SMSP52788 NME2P1-201ENST00000426182 414 ntBASIC14.78□□□□□ -0.04
SMSP52788 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.78□□□□□ -0.04
SMSP52788 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 RARRES2P9-201ENST00000565168 469 ntBASIC14.78□□□□□ -0.04
SMSP52788 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 SPDYE22P-201ENST00000582158 798 ntBASIC14.78□□□□□ -0.04
SMSP52788 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.78□□□□□ -0.04
SMSP52788 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 AC136621.1-201ENST00000624017 2304 ntBASIC14.78□□□□□ -0.04
SMSP52788 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 TNRC18P2-201ENST00000417666 2714 ntBASIC14.78□□□□□ -0.04
SMSP52788 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.78□□□□□ -0.04
SMSP52788 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMSP52788 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SMSP52788 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SMSP52788 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.04
SMSP52788 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
SMSP52788 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMSP52788 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms