Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC079781.4-201ENST00000641908 219 ntBASIC14.03□□□□□ -0.16
SRP9P49458 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
SRP9P49458 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SRP9P49458 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SRP9P49458 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SRP9P49458 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.03□□□□□ -0.16
SRP9P49458 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.03□□□□□ -0.16
SRP9P49458 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SRP9P49458 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
SRP9P49458 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SRP9P49458 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SRP9P49458 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.02□□□□□ -0.16
SRP9P49458 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SRP9P49458 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SRP9P49458 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
SRP9P49458 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 TIMM8BP1-201ENST00000452384 211 ntBASIC14.02□□□□□ -0.17
SRP9P49458 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.02□□□□□ -0.17
SRP9P49458 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.02□□□□□ -0.17
SRP9P49458 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SRP9P49458 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SRP9P49458 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SRP9P49458 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SRP9P49458 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.01□□□□□ -0.17
SRP9P49458 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.01□□□□□ -0.17
SRP9P49458 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
SRP9P49458 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms