Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CDC34P49427 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CDC34P49427 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.48□□□□□ -0.41
CDC34P49427 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 KRT16P4-201ENST00000453883 522 ntBASIC12.48□□□□□ -0.41
CDC34P49427 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 DUX4L26-201ENST00000489078 1255 ntBASIC12.48□□□□□ -0.41
CDC34P49427 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.48□□□□□ -0.41
CDC34P49427 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.48□□□□□ -0.41
CDC34P49427 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 MTDHP4-201ENST00000600287 670 ntBASIC12.48□□□□□ -0.41
CDC34P49427 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 INTS4P1-203ENST00000641008 3683 ntBASIC12.48□□□□□ -0.41
CDC34P49427 AC140479.7-201ENST00000636301 2332 ntBASIC12.48□□□□□ -0.41
CDC34P49427 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.47□□□□□ -0.41
CDC34P49427 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
CDC34P49427 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CDC34P49427 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CDC34P49427 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CDC34P49427 PMS2P4-201ENST00000412466 1052 ntBASIC12.47□□□□□ -0.41
CDC34P49427 AL645939.2-201ENST00000427340 991 ntBASIC12.47□□□□□ -0.41
CDC34P49427 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.47□□□□□ -0.41
CDC34P49427 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.47□□□□□ -0.41
CDC34P49427 RPS15P9-201ENST00000494093 319 ntBASIC12.47□□□□□ -0.41
CDC34P49427 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC12.47□□□□□ -0.41
CDC34P49427 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 AC006557.2-201ENST00000592985 1240 ntBASIC12.47□□□□□ -0.41
CDC34P49427 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CDC34P49427 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.47□□□□□ -0.41
CDC34P49427 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CDC34P49427 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.46□□□□□ -0.41
CDC34P49427 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CDC34P49427 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.46□□□□□ -0.41
CDC34P49427 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CDC34P49427 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms