Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.6■□□□□ 0.25
PCK1P35558 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.6■□□□□ 0.25
PCK1P35558 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
PCK1P35558 HNRNPUP1-201ENST00000554987 333 ntBASIC16.6■□□□□ 0.25
PCK1P35558 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.6■□□□□ 0.25
PCK1P35558 AC097359.3-201ENST00000603982 1210 ntBASIC16.6■□□□□ 0.25
PCK1P35558 RN7SL828P-201ENST00000607615 303 ntBASIC16.6■□□□□ 0.25
PCK1P35558 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PCK1P35558 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.6■□□□□ 0.25
PCK1P35558 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.6■□□□□ 0.25
PCK1P35558 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PCK1P35558 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCK1P35558 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 TMBIM7P-203ENST00000641617 1718 ntBASIC16.59■□□□□ 0.25
PCK1P35558 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.59■□□□□ 0.25
PCK1P35558 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 AC136604.1-201ENST00000418535 575 ntBASIC16.59■□□□□ 0.25
PCK1P35558 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 SNHG9-202ENST00000564014 471 ntBASIC16.59■□□□□ 0.25
PCK1P35558 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PCK1P35558 AC027612.4-201ENST00000605371 583 ntBASIC16.59■□□□□ 0.25
PCK1P35558 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.59■□□□□ 0.25
PCK1P35558 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCK1P35558 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCK1P35558 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCK1P35558 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.58■□□□□ 0.25
PCK1P35558 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCK1P35558 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PCK1P35558 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.58■□□□□ 0.25
PCK1P35558 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCK1P35558 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 AZGP1P1-201ENST00000411909 902 ntBASIC16.58■□□□□ 0.24
PCK1P35558 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.58■□□□□ 0.24
PCK1P35558 MIR4453-201ENST00000584019 89 ntBASIC16.58■□□□□ 0.24
PCK1P35558 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.58■□□□□ 0.24
PCK1P35558 MIR6080-201ENST00000617359 66 ntBASIC16.58■□□□□ 0.24
PCK1P35558 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.58■□□□□ 0.24
PCK1P35558 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms