Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.94□□□□□ -0.02
RORAP35398 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.94□□□□□ -0.02
RORAP35398 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.94□□□□□ -0.02
RORAP35398 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.94□□□□□ -0.02
RORAP35398 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.94□□□□□ -0.02
RORAP35398 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 AL033527.5-201ENST00000641382 801 ntBASIC14.94□□□□□ -0.02
RORAP35398 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 AC069224.1-201ENST00000566372 1715 ntBASIC14.93□□□□□ -0.02
RORAP35398 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.93□□□□□ -0.02
RORAP35398 AC007389.4-201ENST00000454674 793 ntBASIC14.93□□□□□ -0.02
RORAP35398 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.93□□□□□ -0.02
RORAP35398 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.93□□□□□ -0.02
RORAP35398 HILS1-202ENST00000545329 423 ntBASIC14.93□□□□□ -0.02
RORAP35398 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.93□□□□□ -0.02
RORAP35398 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RORAP35398 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RORAP35398 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.93□□□□□ -0.02
RORAP35398 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RORAP35398 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.92□□□□□ -0.02
RORAP35398 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 LINC02447-202ENST00000501888 2146 ntBASIC14.92□□□□□ -0.02
RORAP35398 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 TMEM14DP-201ENST00000422205 345 ntBASIC14.92□□□□□ -0.02
RORAP35398 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 FAM86LP-201ENST00000478302 853 ntBASIC14.92□□□□□ -0.02
RORAP35398 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.92□□□□□ -0.02
RORAP35398 IGHV3-71-201ENST00000523324 359 ntBASIC14.92□□□□□ -0.02
RORAP35398 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.92□□□□□ -0.02
RORAP35398 BRI3BPP1-201ENST00000594224 787 ntBASIC14.92□□□□□ -0.02
RORAP35398 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
RORAP35398 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms