Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
CKS2P33552 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 LINC01230-201ENST00000625222 3017 ntBASIC11.62□□□□□ -0.55
CKS2P33552 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 AC009090.5-201ENST00000624886 2285 ntBASIC11.62□□□□□ -0.55
CKS2P33552 FP325330.2-201ENST00000624219 5630 ntBASIC11.62□□□□□ -0.55
CKS2P33552 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 AC073508.3-201ENST00000619697 1419 ntBASIC11.62□□□□□ -0.55
CKS2P33552 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 AC023024.2-201ENST00000623561 1993 ntBASIC11.62□□□□□ -0.55
CKS2P33552 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 AC139887.3-201ENST00000568585 713 ntBASIC11.62□□□□□ -0.55
CKS2P33552 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.62□□□□□ -0.55
CKS2P33552 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.62□□□□□ -0.55
CKS2P33552 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CKS2P33552 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CKS2P33552 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
CKS2P33552 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.62□□□□□ -0.55
CKS2P33552 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.62□□□□□ -0.55
CKS2P33552 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CKS2P33552 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 AP005117.1-201ENST00000584346 1413 ntBASIC11.61□□□□□ -0.55
CKS2P33552 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 AC012569.1-201ENST00000591191 1524 ntBASIC11.61□□□□□ -0.55
CKS2P33552 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.61□□□□□ -0.55
CKS2P33552 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CKS2P33552 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 AL136038.3-201ENST00000561909 1096 ntBASIC11.61□□□□□ -0.55
CKS2P33552 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.61□□□□□ -0.55
CKS2P33552 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.61□□□□□ -0.55
CKS2P33552 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.61□□□□□ -0.55
CKS2P33552 AC140479.7-201ENST00000636301 2332 ntBASIC11.61□□□□□ -0.55
CKS2P33552 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CKS2P33552 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CKS2P33552 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CKS2P33552 CICP14-201ENST00000629111 2732 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms