Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINGO3P0C6S8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.3■□□□□ 0.04
LINGO3P0C6S8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AC092919.2-201ENST00000623631 1645 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 RHOQP3-201ENST00000437982 621 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 KRT18P2-201ENST00000447938 1258 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AC140113.2-201ENST00000604370 208 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 FAM197Y3-203ENST00000618346 717 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 AC005562.1-201ENST00000583030 3219 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 SNX33P1-201ENST00000592116 1762 ntBASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINGO3P0C6S8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AC012569.1-201ENST00000591191 1524 ntBASIC15.28■□□□□ 0.04
LINGO3P0C6S8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 MED15P5-201ENST00000423150 992 ntBASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.28■□□□□ 0.04
LINGO3P0C6S8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 AL512652.2-201ENST00000625156 1716 ntBASIC15.28■□□□□ 0.04
LINGO3P0C6S8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms