Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
GAPDHP04406 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GAPDHP04406 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
GAPDHP04406 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.22□□□□□ -0.29
GAPDHP04406 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GAPDHP04406 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.22□□□□□ -0.29
GAPDHP04406 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GAPDHP04406 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GAPDHP04406 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
GAPDHP04406 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAPDHP04406 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.21□□□□□ -0.29
GAPDHP04406 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 RPSAP43-201ENST00000402237 625 ntBASIC13.21□□□□□ -0.29
GAPDHP04406 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.21□□□□□ -0.29
GAPDHP04406 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 SPCS2P4-201ENST00000436160 681 ntBASIC13.21□□□□□ -0.29
GAPDHP04406 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.21□□□□□ -0.29
GAPDHP04406 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.21□□□□□ -0.29
GAPDHP04406 YBX1P5-201ENST00000509441 847 ntBASIC13.21□□□□□ -0.29
GAPDHP04406 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.21□□□□□ -0.29
GAPDHP04406 UXT-AS1-201ENST00000590504 1525 ntBASIC13.21□□□□□ -0.29
GAPDHP04406 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GAPDHP04406 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GAPDHP04406 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GAPDHP04406 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
GAPDHP04406 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
GAPDHP04406 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.21□□□□□ -0.3
GAPDHP04406 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.21□□□□□ -0.3
GAPDHP04406 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GAPDHP04406 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
GAPDHP04406 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.2□□□□□ -0.3
GAPDHP04406 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
GAPDHP04406 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 AC005237.2-201ENST00000434368 219 ntBASIC13.2□□□□□ -0.3
GAPDHP04406 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.2□□□□□ -0.3
GAPDHP04406 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms