Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.99■□□□□ 0.47
COL2A1P02458 AC010491.1-201ENST00000563101 2797 ntBASIC17.99■□□□□ 0.47
COL2A1P02458 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.99■□□□□ 0.47
COL2A1P02458 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.99■□□□□ 0.47
COL2A1P02458 AL118508.1-201ENST00000613502 2345 ntBASIC17.99■□□□□ 0.47
COL2A1P02458 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.99■□□□□ 0.47
COL2A1P02458 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.99■□□□□ 0.47
COL2A1P02458 BX284668.4-201ENST00000453917 508 ntBASIC17.99■□□□□ 0.47
COL2A1P02458 FTLP10-202ENST00000505798 471 ntBASIC17.99■□□□□ 0.47
COL2A1P02458 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.99■□□□□ 0.47
COL2A1P02458 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL2A1P02458 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.99■□□□□ 0.47
COL2A1P02458 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 AP000593.2-201ENST00000542775 1433 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.98■□□□□ 0.47
COL2A1P02458 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.98■□□□□ 0.47
COL2A1P02458 AC004466.1-201ENST00000599515 1080 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.98■□□□□ 0.47
COL2A1P02458 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 AP005117.1-202ENST00000581724 1908 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 REXO1L4P-201ENST00000605109 1937 ntBASIC17.98■□□□□ 0.47
COL2A1P02458 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.98■□□□□ 0.47
COL2A1P02458 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL2A1P02458 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL2A1P02458 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.97■□□□□ 0.47
COL2A1P02458 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.97■□□□□ 0.47
COL2A1P02458 RN7SL190P-201ENST00000582519 257 ntBASIC17.97■□□□□ 0.47
COL2A1P02458 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
COL2A1P02458 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 AC092127.1-201ENST00000567093 3455 ntBASIC17.97■□□□□ 0.47
COL2A1P02458 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.97■□□□□ 0.47
COL2A1P02458 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.97■□□□□ 0.47
COL2A1P02458 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.97■□□□□ 0.47
COL2A1P02458 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL2A1P02458 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms