Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 AC093458.2-201ENST00000623150 629 ntBASIC11.89□□□□□ -0.51
HLA-DQA1P01909 AL358472.4-201ENST00000633140 710 ntBASIC11.89□□□□□ -0.51
HLA-DQA1P01909 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
HLA-DQA1P01909 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 KRT18P1-202ENST00000452408 1331 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 WASH6P-202ENST00000359512 1437 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CHCHD2P8-201ENST00000429873 447 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AC069148.1-201ENST00000608741 768 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AP000550.4-202ENST00000639755 178 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CICP8-201ENST00000455800 2813 ntBASIC11.88□□□□□ -0.51
HLA-DQA1P01909 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DQA1P01909 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 AL590787.1-201ENST00000568856 1315 ntBASIC11.87□□□□□ -0.51
HLA-DQA1P01909 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 TSSC2-201ENST00000450217 709 ntBASIC11.87□□□□□ -0.51
HLA-DQA1P01909 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DQA1P01909 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms