Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.16■□□□□ 0.02
CPNE3O75131 RN7SL752P-201ENST00000463779 287 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.16■□□□□ 0.02
CPNE3O75131 AC023310.3-201ENST00000557027 670 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 AC100756.1-201ENST00000562736 682 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 AC138749.3-201ENST00000567691 622 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 CHCHD2P3-201ENST00000603038 451 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 AC116165.1-201ENST00000611806 668 ntBASIC15.16■□□□□ 0.02
CPNE3O75131 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.16■□□□□ 0.02
CPNE3O75131 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE3O75131 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE3O75131 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE3O75131 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 CYP2T1P-202ENST00000641596 2535 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 REXO1L8P-201ENST00000604378 1897 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CPNE3O75131 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 EEF1DP4-201ENST00000446006 880 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CPNE3O75131 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CPNE3O75131 WASH4P-201ENST00000564273 1246 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.15■□□□□ 0.02
CPNE3O75131 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.15■□□□□ 0.02
CPNE3O75131 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CPNE3O75131 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 KRT8P37-201ENST00000451609 1420 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CPNE3O75131 AP002414.2-201ENST00000591780 3365 ntBASIC15.15■□□□□ 0.02
CPNE3O75131 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CPNE3O75131 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE3O75131 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CPNE3O75131 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CPNE3O75131 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE3O75131 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CPNE3O75131 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CPNE3O75131 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE3O75131 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 AL589987.1-201ENST00000453380 819 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms