Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAF3IP2O43734 HYMAI-201ENST00000635591 3347 ntBASIC14□□□□□ -0.17
TRAF3IP2O43734 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AL365209.1-201ENST00000624418 6473 ntBASIC14□□□□□ -0.17
TRAF3IP2O43734 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAF3IP2O43734 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAF3IP2O43734 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAF3IP2O43734 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRAF3IP2O43734 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRAF3IP2O43734 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAF3IP2O43734 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14□□□□□ -0.17
TRAF3IP2O43734 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC015922.1-201ENST00000421102 1152 ntBASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC004890.2-204ENST00000481968 304 ntBASIC13.99□□□□□ -0.17
TRAF3IP2O43734 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC009407.1-201ENST00000568958 598 ntBASIC13.99□□□□□ -0.17
TRAF3IP2O43734 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AC005498.2-205ENST00000593218 784 ntBASIC13.99□□□□□ -0.17
TRAF3IP2O43734 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms