Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP2AO43633 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP2AO43633 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP2AO43633 AC009090.5-201ENST00000624886 2285 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 AC138969.3-201ENST00000546612 1459 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 AC138932.2-201ENST00000548268 1459 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 AC126755.4-201ENST00000549796 1459 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHMP2AO43633 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 RN7SL399P-201ENST00000471648 279 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 ELK1P1-201ENST00000485699 580 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP2AO43633 CTBP2P3-201ENST00000585629 1255 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP2AO43633 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.64■□□□□ 0.41
CHMP2AO43633 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP2AO43633 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 AC007950.2-201ENST00000615045 2347 ntBASIC17.64■□□□□ 0.41
CHMP2AO43633 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP2AO43633 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP2AO43633 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP2AO43633 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CHMP2AO43633 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CHMP2AO43633 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 KRT18P43-201ENST00000469825 1281 ntBASIC17.63■□□□□ 0.41
CHMP2AO43633 FAM86LP-201ENST00000478302 853 ntBASIC17.63■□□□□ 0.41
CHMP2AO43633 AC104596.2-201ENST00000512793 793 ntBASIC17.63■□□□□ 0.41
CHMP2AO43633 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 AC005225.4-201ENST00000557330 545 ntBASIC17.63■□□□□ 0.41
CHMP2AO43633 AL596325.1-201ENST00000563991 1082 ntBASIC17.63■□□□□ 0.41
CHMP2AO43633 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP2AO43633 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CHMP2AO43633 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP2AO43633 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP2AO43633 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP2AO43633 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP2AO43633 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHMP2AO43633 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP2AO43633 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.62■□□□□ 0.41
CHMP2AO43633 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHMP2AO43633 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms