Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
FOXN1O15353 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
FOXN1O15353 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXN1O15353 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
FOXN1O15353 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.7■□□□□ 0.58
FOXN1O15353 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC18.7■□□□□ 0.58
FOXN1O15353 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 AC006480.2-201ENST00000609770 1337 ntBASIC18.7■□□□□ 0.58
FOXN1O15353 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.7■□□□□ 0.58
FOXN1O15353 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXN1O15353 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FOXN1O15353 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 MSTO2P-201ENST00000314835 1709 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 AL365203.3-201ENST00000609742 2057 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 AC010491.1-201ENST00000563101 2797 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 AC024909.3-201ENST00000611513 2257 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FOXN1O15353 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FOXN1O15353 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN1O15353 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN1O15353 AC134698.3-201ENST00000523880 214 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 PRKXP1-201ENST00000561423 1122 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 MIR3147-201ENST00000577811 66 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 MIR3907-201ENST00000579424 151 ntBASIC18.69■□□□□ 0.58
FOXN1O15353 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN1O15353 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.69■□□□□ 0.58
FOXN1O15353 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN1O15353 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.69■□□□□ 0.58
FOXN1O15353 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXN1O15353 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXN1O15353 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXN1O15353 GPAA1P2-202ENST00000606848 1787 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FOXN1O15353 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 KRT8P37-201ENST00000451609 1420 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.68■□□□□ 0.58
FOXN1O15353 CYP46A4P-201ENST00000414953 267 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.68■□□□□ 0.58
FOXN1O15353 AL133466.1-201ENST00000447582 150 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXN1O15353 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
FOXN1O15353 MIR4741-201ENST00000579822 90 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 AC079336.7-201ENST00000623428 1078 ntBASIC18.68■□□□□ 0.58
FOXN1O15353 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
FOXN1O15353 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXN1O15353 REXO1L8P-201ENST00000604378 1897 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms