Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 AL391825.1-201ENST00000457671 1364 ntBASIC15.86■□□□□ 0.13
TRIM38O00635 KRT8P12-202ENST00000472924 1397 ntBASIC15.86■□□□□ 0.13
TRIM38O00635 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM38O00635 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM38O00635 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM38O00635 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM38O00635 PRAL-201ENST00000624952 3286 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM38O00635 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRIM38O00635 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 AP006294.1-201ENST00000415407 339 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 AC114501.2-201ENST00000439631 535 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 SERBP1P3-201ENST00000459980 809 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 RN7SL752P-201ENST00000463779 287 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM38O00635 GIMAP3P-201ENST00000495150 836 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 AC093004.1-201ENST00000508850 424 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 IGHV3-71-201ENST00000523324 359 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM38O00635 WASH4P-201ENST00000564273 1246 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.85■□□□□ 0.13
TRIM38O00635 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.85■□□□□ 0.13
TRIM38O00635 AC020765.3-201ENST00000613051 740 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 AL033527.5-202ENST00000641632 1098 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TRIM38O00635 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 AC069224.1-201ENST00000566372 1715 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 AC068587.6-202ENST00000641839 5619 ntBASIC15.85■□□□□ 0.13
TRIM38O00635 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRIM38O00635 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRIM38O00635 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 FAM45BP-202ENST00000592932 1624 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 AC023157.3-201ENST00000619086 2088 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
TRIM38O00635 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TRIM38O00635 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 GPR53P-205ENST00000457298 1084 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM38O00635 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.84■□□□□ 0.13
TRIM38O00635 HILS1-202ENST00000545329 423 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.84■□□□□ 0.13
TRIM38O00635 AC132938.2-201ENST00000579188 680 ntBASIC15.84■□□□□ 0.13
TRIM38O00635 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.84■□□□□ 0.13
TRIM38O00635 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRIM38O00635 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.84■□□□□ 0.13
TRIM38O00635 AL591163.1-201ENST00000641757 987 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms